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BaseInfo

ncRNA ID	novel_osa_miR2825
Species	Oryza sativa
Class	miRNA
Genome position	Chr6:14357961-14358043 [+]
Reference genome	IRGSP-1.0
Source	SRR2040381;SRR2040396
Length	21
Mature sequence(if miRNA)	1 - UUAGUCCCGGUUUGUAGUACC - 21
Stem-loop(if miRNA)	--            U      C         A     AUCU   UUAGUCCCGGUU GUAGUA CAAUCGGGA UAAAG    A   |||||||||||| |||||| ||||||||| |||||    A   AAUCAGGGCCAA CAUCAU GUUGGCCUU AUUUC    A GA            C      U         C     AAAU
Stem-loop sequence	UUAGUCCCGGUUUGUAGUACCAAUCGGGAAUAAAGAUCUAAAUAAACUUUACUUCCGGUUGUUACUACCAACCGGGACUAAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK061057.1	ncRNA:21   CCAUGAUGUUUGGCCCUGAUU   1   ||||*|||*|||||||||||| targets:370   GGUAAUACCAACCGGGACUAA   390 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:006-205-H07, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:21   CCAUGAUGUUUGGCCCUGAUU   1   ||||*|||*|||||||||||| targets:1386   GGUAAUACCAACCGGGACUAA   1406 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
XM_015759969.1	ncRNA:21   CCAUGAUGUUUGGCCCUGAUU   1   ***|=||*||||||||||||| targets:1815   CACAUUAAAAACCGGGACUAA   1835 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group F-box/LRR-repeat protein At3g58930 (LOC9269963), transcript variant X3, mRNA	F-box/LRR-repeat protein At3g58930(LOC9269963)	coding protein	psRNATarget
XM_015759968.1	ncRNA:21   CCAUGAUGUUUGGCCCUGAUU   1   ***|=||*||||||||||||| targets:3313   CACAUUAAAAACCGGGACUAA   3333 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group F-box/LRR-repeat protein At3g58930 (LOC9269963), transcript variant X1, mRNA	F-box/LRR-repeat protein At3g58930(LOC9269963)	coding protein	psRNATarget