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BaseInfo

ncRNA ID	novel_osa_miR2818
Species	Oryza sativa
Class	miRNA
Genome position	Chr10:9966720-9966847 [+]
Reference genome	IRGSP-1.0
Source	SRR2040381;SRR2040403;SRR2040408
Length	21
Mature sequence(if miRNA)	108 - UUUUUCGAUCCAACGGCAGUU - 128
Stem-loop(if miRNA)	--  AA                   C                  AC    GAAUAAAACC        A   CU  UGUUGGAUCGAAAAAUGGA GUCUGAGAUUCGUUCACG  UCGU          GUGAGUAA A   ||  ||||||||||||||||||| ||||||||||||||||||  ||||          |||||||| U   GA  GCAACCUAGCUUUUUACCU CAGGCUCUAAGCAGGUGU  AGUA          UACUCAUU U UU  CG                   A                  --    ---------A        U
Stem-loop sequence	CUAAUGUUGGAUCGAAAAAUGGACGUCUGAGAUUCGUUCACGACUCGUGAAUAAAACCGUGAGUAAAAUUUUUACUCAUAAUGAUGUGGACGAAUCUCGGACAUCCAUUUUUCGAUCCAACGGCAGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015763997.1	ncRNA:21   UUGACGGCAACCUAGCUUUUU   1   ||||*||||||||||||=||| targets:814   AACUACCGUUGGAUCGAGAAA   834 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group chitinase-like protein 2 (LOC107279727), mRNA	chitinase-like protein 2(LOC107279727)	coding protein	psRNATarget
XM_015792283.1	ncRNA:21   UUGACGGCAACCUAGCUUUUU   1   ||||*==|||||||||||||| targets:1087   AACUAUUGUUGGAUCGAAAAA   1107 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group momilactone A synthase-like (LOC4344208), transcript variant X1, mRNA	momilactone A synthase-like(LOC4344208)	coding protein	psRNATarget
XM_015792284.1	ncRNA:21   UUGACGGCAACCUAGCUUUUU   1   ||||*==|||||||||||||| targets:1096   AACUAUUGUUGGAUCGAAAAA   1116 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group momilactone A synthase-like (LOC4344208), transcript variant X2, mRNA	momilactone A synthase-like(LOC4344208)	coding protein	psRNATarget
XM_015789578.1	ncRNA:21   UUGACGGCAACCUAGCUUUUU   1   ||||**=|||||||||||||| targets:1786   AACUAAUGUUGGAUCGAAAAA   1806 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group protein SRC2 (LOC9270916), mRNA	protein SRC2(LOC9270916)	coding protein	psRNATarget
XM_015755494.1	ncRNA:21   UUGACGGCAACCUAGCUUUUU   1   ||||*||*||||||||||||* targets:428   AACUACCAUUGGAUCGAAAAU   448 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277973 (LOC107277973), transcript variant X1, mRNA	uncharacterized LOC107277973(LOC107277973)	coding protein	psRNATarget