ncRNA ID | novel_osa_miR2817 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:19531171-19531245 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR2040381;SRR2040385;SRR2040389;SRR2040393;SRR2040396;SRR2040397;SRR2040401;SRR2040404 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGACGGGCUGUAGUUUAGGCC - 21 |
Stem-loop(if miRNA) |
--         G   -          A        A A   UGACGGGCU UAG UUUAGGCCCG UUGAGAUA C U   ||||||||| ||| |||||||||| |||||||| |   ACUGCCCGG GUU AAGUCCGGGC AACUCUAU G U AC         G   G          A        A C |
Stem-loop sequence | UGACGGGCUGUAGUUUAGGCCCGAUUGAGAUAACAUUCGAUAUCUCAAACGGGCCUGAAGUUGGGGCCCGUCACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015779200.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group L-type lectin-domain containing receptor kinase IX.1-like (LOC107276703), mRNA | L-type lectin-domain containing receptor kinase IX.1-like(LOC107276703) | coding protein | psRNATarget |