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BaseInfo

ncRNA ID novel_osa_miR2817
Species Oryza sativa
Class miRNA
Genome position Chr4:19531171-19531245 [+]
Reference genome IRGSP-1.0
Source SRR2040381;SRR2040385;SRR2040389;SRR2040393;SRR2040396;SRR2040397;SRR2040401;SRR2040404
Length 21
Mature sequence(if miRNA) 1 - UGACGGGCUGUAGUUUAGGCC - 21
Stem-loop(if miRNA) --         G   -          A        A A
  UGACGGGCU UAG UUUAGGCCCG UUGAGAUA C U
  ||||||||| ||| |||||||||| |||||||| |
  ACUGCCCGG GUU AAGUCCGGGC AACUCUAU G U
AC         G   G          A        A C
Stem-loop sequence UGACGGGCUGUAGUUUAGGCCCGAUUGAGAUAACAUUCGAUAUCUCAAACGGGCCUGAAGUUGGGGCCCGUCACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015779200.1
ncRNA:21   CCGGAUUUGAUGUCGGGCAGU   1
  ||||||||||||=||||||||
targets:59   GGCCUAAACUACGGCCCGUCA   79

1.5 PREDICTED: Oryza sativa Japonica Group L-type lectin-domain containing receptor kinase IX.1-like (LOC107276703), mRNA L-type lectin-domain containing receptor kinase IX.1-like(LOC107276703) coding protein psRNATarget