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BaseInfo

ncRNA ID novel_osa_miR2811
Species Oryza sativa
Class miRNA
Genome position Chr2:35586387-35586441 [-]
Reference genome IRGSP-1.0
Source SRR2040381;SRR5049790
Length 21
Mature sequence(if miRNA) 35 - ACCUUGGUAUCAGUCGGUACC - 55
Stem-loop(if miRNA) --   -UU                   U
  ACC   GGUAUCAGUCGGUACCAGG A
  |||   |||||||||||||||||||
  UGG   CCAUAGUCAGCCAUGGUUU C
CA   UUU                   C
Stem-loop sequence ACCUUGGUAUCAGUCGGUACCAGGUACCUUUGGUACCGACUGAUACCUUUGGUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK107588.1
ncRNA:21   CCAUGGCUGACUAUGGUUCCA   1
  |||||||||||||||||||||
targets:651   GGUACCGACUGAUACCAAGGU   671

0.0 Oryza sativa Japonica Group cDNA clone:002-131-A03, full insert sequence NA coding protein psRNATarget
AK064111.1
ncRNA:21   CCAUGGCUGACUAUGGUUCCA   1
  |||||*||||||||||*||||
targets:760   GGUACGGACUGAUACCUAGGU   780

2.5 Oryza sativa Japonica Group cDNA clone:002-101-G12, full insert sequence NA coding protein psRNATarget