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BaseInfo

ncRNA ID	novel_osa_miR2777
Species	Oryza sativa
Class	miRNA
Genome position	Chr4:23585331-23585499 [-]
Reference genome	IRGSP-1.0
Source	SRR2040380
Length	24
Mature sequence(if miRNA)	146 - GAUGCUGUUGACUUUUUUAAACAU - 169
Stem-loop(if miRNA)	--                      A             AUC     CA             AUUAUUAAAUCUUUUCAUAUC UUUGAUUCAUUG   GAUGCUGUUGACUUUUUUAAAC UGUUUGACCGUUC   UUAUU  AAAAAUUUAAGUA                     A            U   |||||||||||||||||||||| |||||||||||||   |||||  |||||||||||||                     |   CUGCGGCAACUGGAAAAAUUUG ACAAACUGGCGAG   AAUAA  UUUUUGAAUUCAU                     G            U AA                      A             CAA     -A             --------------------C UCAUCAUAUAAA
Stem-loop sequence	GAUGCUGUUGACUUUUUUAAACAUGUUUGACCGUUCAUCUUAUUCAAAAAAUUUAAGUAAUUAUUAAAUCUUUUCAUAUCAUUUGAUUCAUUGUUAAAUAUACUACUGCUACUUAAGUUUUUAAAUAAAACGAGCGGUCAAACAAGUUUAAAAAGGUCAACGGCGUCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288408.1	ncRNA:24   UACAAAUUUUUUCAGUUGUCGUAG   1   |||||||||||||||||||||=|| targets:2994   AUGUUUAAAAAAGUCAACAGCGUC   3017 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090030J08, full insert sequence	NA	coding protein	psRNATarget
AK287756.1	ncRNA:24   UACAAAUUUUUUCAGUUGUCGUAG   1   ||*|||||||||||||||=||||* targets:2724   AUAUUUAAAAAAGUCAACGGCAUA   2747 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065161D16, full insert sequence	NA	coding protein	psRNATarget
AK289103.1	ncRNA:24   UACAAAUUUUUUCAGUUGUCGUAG   1   ||*|||*|||||||||||=||||| targets:389   AUUUUUUAAAAAGUCAACGGCAUC   412 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090096G10, full insert sequence	NA	coding protein	psRNATarget
XM_015755113.1	ncRNA:24   UACAAAUUUUUUCAGUUGUCGUAG   1   ||*|||*|||||||||||=||||| targets:383   AUUUUUUAAAAAGUCAACGGCAUC   406 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group zinc-finger homeodomain protein 9 (LOC4347054), mRNA	zinc-finger homeodomain protein 9(LOC4347054)	coding protein	psRNATarget