ncRNA ID | novel_osa_miR2767 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:16920196-16920310 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR2040380 |
Length | 22 |
Mature sequence(if miRNA) | 94 - UAAGACUUUCUAACAUUUGCCU - 115 |
Stem-loop(if miRNA) |
--            A    U               U                A    U   UAAGACUUUCUA CAUU GCCUACAUUCAUAUA AUGUUAAUGAAUCUAG CAUA A   |||||||||||| |||| ||||||||||||||| |||||||||||||||| ||||   AUUCUGAAAGAU GUAA UGGGUGUAAGUAUGU UACAAUUACUUAGAUC GUGU U AU            C    -               C                C    G |
Stem-loop sequence | UAAGACUUUCUAACAUUUGCCUACAUUCAUAUAUAUGUUAAUGAAUCUAGACAUAUAUGUGUGCCUAGAUUCAUUAACAUCUGUAUGAAUGUGGGUAAUGCUAGAAAGUCUUAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK106777.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:002-115-G12, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK067660.1 |
|
2.0 | Oryza sativa Japonica Group cDNA clone:J013116C06, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015763234.1 |
|
2.0 | PREDICTED: Oryza sativa Japonica Group F-box protein At5g25290 (LOC4326973), transcript variant X1, mRNA | F-box protein At5g25290(LOC4326973) | coding protein | psRNATarget |