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BaseInfo

ncRNA ID novel_osa_miR2763
Species Oryza sativa
Class miRNA
Genome position Chr2:8221159-8221223 [+]
Reference genome IRGSP-1.0
Source SRR2040380;SRR1612403
Length 24
Mature sequence(if miRNA) 1 - AGCCGCCGCUGUCGGAUCCGCCUG - 24
Stem-loop(if miRNA) --    G     GU        C U     CG
  AGCC CCGCU  CGGAUCCG C GCGGU  C
  |||| |||||  |||||||| | |||||  C
  UCGG GGCGA  GCCUAGGC G CGCCA  G
CC    A     UG        A U     CC
Stem-loop sequence AGCCGCCGCUGUCGGAUCCGCCUGCGGUCGCCGCCACCGCUGACGGAUCCGGUAGCGGAGGCUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK109245.1
ncRNA:24   GU-CCGCCUAGGCUGUCGCCGCCGA   1
  ||-||=|||||||||||||*|||||
targets:286   CACGGUGGAUCCGACAGCGACGGCU   310

1.5 Oryza sativa Japonica Group cDNA clone:002-156-G06, full insert sequence NA coding protein psRNATarget
AK072464.1
ncRNA:24   GUCCGCCUAGGCUGUCGCCGCCGA   1
  ||--||||||||=||||||||||*
targets:372   CA--CGGAUCCGGCAGCGGCGGCC   393

2.5 Oryza sativa Japonica Group cDNA clone:J023120F04, full insert sequence NA coding protein psRNATarget