ncRNA ID | novel_osa_miR2753 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr10:17243004-17243187 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1849787 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UUUAUUUUCGCAUACGGCUU - 20 |
Stem-loop(if miRNA) |
---UUUA     G       CUU                                         G GC   U U A        C       A        UUUUC CAUACGG   CUUAAGUGGUCCGUAUGGAAAAAUCGAUUUUUCCAUGCGGG C  UUA G G GCCGUAUG AAAAAUG G        ||||| |||||||   ||||||||||||||||||||||||||||||||||||||||| |  ||| | | |||||||| |||||||        AAAAG GUAUGCC   GAAUUCACCGGGCAUACUUUUUUAGCUAAAAGGGUAUGCCU G  AAU C C CGGCGUAC UUUUUAC C CUCAGUA     -       AAC                                         G AU   U U C        A       U |
Stem-loop sequence | UUUAUUUUCGCAUACGGCUUCUUAAGUGGUCCGUAUGGAAAAAUCGAUUUUUCCAUGCGGGGCGCUUAUGUGAGCCGUAUGCAAAAAUGAGCUCAUUUUUACAUGCGGCCCUCUUAAUAGGUCCGUAUGGGAAAAUCGAUUUUUUCAUACGGGCCACUUAAGCAACCGUAUGGAAAAAUGACUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288397.1 |
|
3.0 | Oryza sativa Japonica Group cDNA, clone: J090028B18, full insert sequence | NA | coding protein | psRNATarget |