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BaseInfo

ncRNA ID novel_osa_miR2753
Species Oryza sativa
Class miRNA
Genome position Chr10:17243004-17243187 [+]
Reference genome IRGSP-1.0
Source SRR1849787
Length 20
Mature sequence(if miRNA) 1 - UUUAUUUUCGCAUACGGCUU - 20
Stem-loop(if miRNA) ---UUUA     G       CUU                                         G GC   U U A        C       A
       UUUUC CAUACGG   CUUAAGUGGUCCGUAUGGAAAAAUCGAUUUUUCCAUGCGGG C  UUA G G GCCGUAUG AAAAAUG G
       ||||| |||||||   ||||||||||||||||||||||||||||||||||||||||| |  ||| | | |||||||| |||||||
       AAAAG GUAUGCC   GAAUUCACCGGGCAUACUUUUUUAGCUAAAAGGGUAUGCCU G  AAU C C CGGCGUAC UUUUUAC C
CUCAGUA     -       AAC                                         G AU   U U C        A       U
Stem-loop sequence UUUAUUUUCGCAUACGGCUUCUUAAGUGGUCCGUAUGGAAAAAUCGAUUUUUCCAUGCGGGGCGCUUAUGUGAGCCGUAUGCAAAAAUGAGCUCAUUUUUACAUGCGGCCCUCUUAAUAGGUCCGUAUGGGAAAAUCGAUUUUUUCAUACGGGCCACUUAAGCAACCGUAUGGAAAAAUGACUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288397.1
ncRNA:20   UUCGGCAUACGCUUUUAUUU   1
  *=|=||*|||||||||||||
targets:5315   CGGUCGCAUGCGAAAAUAAA   5334

3.0 Oryza sativa Japonica Group cDNA, clone: J090028B18, full insert sequence NA coding protein psRNATarget