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BaseInfo

ncRNA ID novel_osa_miR2734
Species Oryza sativa
Class miRNA
Genome position Chr5:18093911-18093962 [-]
Reference genome IRGSP-1.0
Source SRR1555747;SRR1556020
Length 24
Mature sequence(if miRNA) 29 - GGGGUAUGUGAAGUAGAGGGGAAU - 52
Stem-loop(if miRNA) --     -     AA  -A        U
  GGGGU AUGUG  GU  GAGGGGAA U
  ||||| |||||  ||  ||||||||
  UCUCA UGCAC  CG  CUCCCUUU A
CG     G     --  GC        C
Stem-loop sequence GGGGUAUGUGAAGUAGAGGGGAAUUACUUUCCCUCCGGCCACGUGACUCUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015759672.1
ncRNA:24   UAAGGGGAGAUGAAGUGUAUGGGG   1
  =||==||||*||||||||||||||
targets:3092   GUUUUCCUCAACUUCACAUACCCC   3115

1.0 PREDICTED: Oryza sativa Japonica Group putative disease resistance protein RGA3 (LOC9269182), mRNA putative disease resistance protein RGA3(LOC9269182) coding protein psRNATarget