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BaseInfo

ncRNA ID	novel_osa_miR2731
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:4981184-4981251 [+]
Reference genome	IRGSP-1.0
Source	SRR1555747;SRR1556020
Length	24
Mature sequence(if miRNA)	45 - AGCCGAUUAGGUUAGAUAUCGAUG - 68
Stem-loop(if miRNA)	--C  C           CA        ACA    U    CG UAUCUAAUCUA  AUCGGCUA   UCUG C    || |||||||||||  ||||||||   ||||    GC AUAGAUUGGAU  UAGCCGAU   AGAU U GUA  U           --        GGG    G
Stem-loop sequence	CCGCUAUCUAAUCUACAAUCGGCUAACAUCUGUCUGUAGAGGGUAGCCGAUUAGGUUAGAUAUCGAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK064569.1	ncRNA:24   GUAGCUAUAGAUUGGAUUAGCCGA   1   |||||||||=|||||||||||||| targets:462   CAUCGAUAUUUAACCUAAUCGGCU   485 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:002-112-D07, full insert sequence	NA	coding protein	psRNATarget
AK288643.1	ncRNA:24   GUAGCUAUAGAUUGGAUUAGCCGA   1   |||||||||=|||||||||||||| targets:1576   CAUCGAUAUUUAACCUAAUCGGCU   1599 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090056G13, full insert sequence	NA	coding protein	psRNATarget
AK121353.1	ncRNA:24   GUAGCUAUAGAUUGGAUUAGCCGA   1   ||||*||||=|||||||||||||| targets:1556   CAUCAAUAUUUAACCUAAUCGGCU   1579 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J023122B16, full insert sequence	NA	coding protein	psRNATarget