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BaseInfo

ncRNA ID novel_osa_miR2722
Species Oryza sativa
Class miRNA
Genome position Chr12:23245417-23245502 [+]
Reference genome IRGSP-1.0
Source SRR1849784
Length 23
Mature sequence(if miRNA) 64 - UAGGAAUUGUCUCAUCUACUACU - 86
Stem-loop(if miRNA) --G  CG    GA   C             A           C
   AG  GAUG  ACA UUCCUGAUACAAU AAUUUGGAUAG U
   ||  ||||  ||| ||||||||||||| |||||||||||
   UC  CUAC  UGU AAGGAUUAUGUUA UUAGAUCUGUC A
UCA  AU    UC   U             A           U
Stem-loop sequence GAGCGGAUGGAACACUUCCUGAUACAAUAAAUUUGGAUAGCUAUCUGUCUAGAUUAAUUGUAUUAGGAAUUGUCUCAUCUACUACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288871.1
ncRNA:23   UCAUCAUCUACUCUGUUAAGGAU   1
  ***|*|||||||||||*||||||
targets:4955   CAAAAUAGAUGAGACACUUCCUA   4977

2.5 Oryza sativa Japonica Group cDNA, clone: J090078G09, full insert sequence NA coding protein psRNATarget