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BaseInfo

ncRNA ID	novel_osa_miR2721
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:33905685-33905837 [+]
Reference genome	IRGSP-1.0
Source	SRR1849784;SRR2040386;SRR2040391;SRR2040407
Length	21
Mature sequence(if miRNA)	133 - UCAAGAACCGUAGAAUUGCUC - 153
Stem-loop(if miRNA)	--             C   A  G     A            UUUUUU UAUUGUAAAUUUAGUACCUCUUGGUACCUU   GCAAUUUUACGGU CUU AG AGGUA CAUGAGGUACCA      C                              G   ||||||||||||| ||| || ||||| ||||||||||||      |   CGUUAAGAUGCCA GAA UC UCCAU GUACUCCAUGGU      A                              G CU             A   C  G     G            ---UUA AAUCAUGGAAACCAUGGAUCCAUGGAUCAU
Stem-loop sequence	GCAAUUUUACGGUCCUUAAGGAGGUAACAUGAGGUACCAUUUUUUCUAUUGUAAAUUUAGUACCUCUUGGUACCUUGGUACUAGGUACCUAGGUACCAAAGGUACUAAAAUUUGGUACCUCAUGGUACCUGCUCAAGAACCGUAGAAUUGCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK066407.1	ncRNA:21   CUCGUUAAGAUGCCAAGAACU   1   ||||||||=|||||||||||| targets:3813   GAGCAAUUUUACGGUUCUUGA   3833 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013063J08, full insert sequence	NA	coding protein	psRNATarget
AK288954.1	ncRNA:21   CUCGUUAAGAUGCCAAGAACU   1   ||||||||=|||||||||||| targets:3532   GAGCAAUUUUACGGUUCUUGA   3552 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090083O05, full insert sequence	NA	coding protein	psRNATarget
XM_015789833.1	ncRNA:21   CUCGUUAAGAUGCCAAGAACU   1   |||||||||||||||||||*| targets:3209   GAGCAAUUCUACGGUUCUUAA   3229 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group receptor-like protein 12 (LOC4324067), mRNA	receptor-like protein 12(LOC4324067)	coding protein	psRNATarget
XM_015786027.1	ncRNA:21   CUCGUUAAGAUGCCAAGAACU   1   *||||||||||||||*||||| targets:4597   AAGCAAUUCUACGGUCCUUGA   4617 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group ABC transporter C family member 8 (LOC9267441), mRNA	ABC transporter C family member 8(LOC9267441)	coding protein	psRNATarget