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BaseInfo

ncRNA ID novel_osa_miR2702
Species Oryza sativa
Class miRNA
Genome position Chr7:8503548-8503639 [+]
Reference genome IRGSP-1.0
Source SRR1849784
Length 24
Mature sequence(if miRNA) 1 - CACUAUUUCCCGCUGGCAAAGACG - 24
Stem-loop(if miRNA) --CAC        --    -      ACGCAAAAG     C   GACU
     UAUUUCCC  GCUG GCAAAG         UCAGG GGC    G
     ||||||||  |||| ||||||         ||||| |||
     GUGGAGGG  CGAU CGUUUC         AGUCU CCG    U
CAAAA        UU    U      ACCCUAAUA     -   AGUG
Stem-loop sequence CACUAUUUCCCGCUGGCAAAGACGCAAAAGUCAGGCGGCGACUGUGUGAGCCUCUGAAUAAUCCCACUUUGCUUAGCUUGGGAGGUGAAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288850.1
ncRNA:24   GCAGAAACGGUCGCCCUUUAUCAC   1
  ||||||||||||||||*||||||*
targets:125   CGUCUUUGCCAGCGGGUAAUAGUA   148

2.5 Oryza sativa Japonica Group cDNA, clone: J090075H22, full insert sequence NA coding protein psRNATarget