ncRNA ID | novel_osa_miR2702 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr7:8503548-8503639 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1849784 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CACUAUUUCCCGCUGGCAAAGACG - 24 |
Stem-loop(if miRNA) |
--CAC        --    -      ACGCAAAAG     C   GACU      UAUUUCCC  GCUG GCAAAG         UCAGG GGC    G      ||||||||  |||| ||||||         ||||| |||      GUGGAGGG  CGAU CGUUUC         AGUCU CCG    U CAAAA        UU    U      ACCCUAAUA     -   AGUG |
Stem-loop sequence | CACUAUUUCCCGCUGGCAAAGACGCAAAAGUCAGGCGGCGACUGUGUGAGCCUCUGAAUAAUCCCACUUUGCUUAGCUUGGGAGGUGAAAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288850.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090075H22, full insert sequence | NA | coding protein | psRNATarget |