ncRNA ID | novel_osa_miR2698 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr7:26559901-26560004 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1849784 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUUACGAGAUGUAGAAGUUGAAUU - 24 |
Stem-loop(if miRNA) |
--             C   AC          --ACA    -     -    AUA   UUCAACUUCUACA CUC  AACGAAAAAA     AAUU UGACU GUUA   U   ||||||||||||| |||  ||||||||||     |||| ||||| ||||   AAGUUGAAGAUGU GAG  UUGCUUUUUU     UUGA GUUGA CAAU   A UU             A   CA          GUUAA    U     U    AGU |
Stem-loop sequence | UUCAACUUCUACACCUCACAACGAAAAAAACAAAUUUGACUGUUAAUAUAUGAUAACUAGUUGUAGUUAAUUGUUUUUUCGUUACGAGAUGUAGAAGUUGAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015793191.1 |
|
2.0 | PREDICTED: Oryza sativa Japonica Group probable receptor-like protein kinase At1g67000 (LOC4327950), transcript variant X1, mRNA | probable receptor-like protein kinase At1g67000(LOC4327950) | coding protein | psRNATarget | |||||||||
XM_015792915.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase 89B1 (LOC4345896), transcript variant X1, mRNA | UDP-glycosyltransferase 89B1(LOC4345896) | coding protein | psRNATarget | |||||||||
XM_015793197.1 |
|
2.0 | PREDICTED: Oryza sativa Japonica Group probable receptor-like protein kinase At1g67000 (LOC4327950), transcript variant X2, mRNA | probable receptor-like protein kinase At1g67000(LOC4327950) | coding protein | psRNATarget |