ncRNA ID | novel_osa_miR2692 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr10:9933676-9933869 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1849784 |
Length | 24 |
Mature sequence(if miRNA) | 171 - AAAUGAUCGAGAAUUGACGGAAGU - 194 |
Stem-loop(if miRNA) |
--                            C    -C     C  CG    C     C   CA        C       A       UGCCA    UU   UUCCGUCAAUUCUCGAUCGUUUUUCGUC GCCU  GAUCG UA  GACC AGCCA GCA  UGAUAUGA GUUUCUA CCCUCAU     UGCA  C   |||||||||||||||||||||||||||| ||||  ||||| ||  |||| ||||| |||  |||||||| ||||||| |||||||     ||||  U   AAGGCAGUUAAGAGCUAGUAAAAGGCAG CGGA  CUAGC AU  CUGG UCGGU CGU  GCUAUACU CAAAGAU GGGAGUG     AUGU  A UG                            A    AU     A  AA    A     A   AC        A       G       --UUC    UC |
Stem-loop sequence | UUCCGUCAAUUCUCGAUCGUUUUUCGUCCGCCUCGAUCGCUACGGACCCAGCCACGCACAUGAUAUGACGUUUCUAACCCUCAUUGCCAUGCAUUCUACUUGUACUUGUGAGGGGUAGAAACAUCAUAUCGCAUGCAUGGCUAGGUCAAUAACGAUCUAAGGCAGACGGAAAAUGAUCGAGAAUUGACGGAAGU |