ncRNA ID | novel_osa_miR2690 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr5:9464405-9464568 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1849784 |
Length | 25 |
Mature sequence(if miRNA) | 140 - AGGUGCAGUUUUAAUUGUAAGCAGG - 164 |
Stem-loop(if miRNA) |
--      -A     A  UG     A         ------  GC          C           A  A  A U       U A   AGGUGC  GUUUU AU  UAAGC GGCACCUAU      GG  UCAUAGGUAC GGUUUUUAUUA GA CC G ACAUAUG G U   ||||||  ||||| ||  ||||| |||||||||      ||  |||||||||| ||||||||||| || || | ||||||| |   UCCACG  CAAGA UA  AUUUG CCGUGGAUA      CC  AGUAUCCAUG CCAAAAAUAAU CU GG C UGUAUAC C G UA      GG     A  GU     G         UUGAUG  AU          A           A  A  C U       - C |
Stem-loop sequence | AGGUGCAGUUUUAAUUGUAAGCAGGCACCUAUGGGCUCAUAGGUACCGGUUUUUAUUAAGAACCAGUACAUAUGUGAUGCCCAUAUGUUCCGGAUCAUAAUAAAAACCAGUACCUAUGAUACCGUAGUUAUAGGUGCCGGUUUAUGAUAAGAACGGGCACCUAU |