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BaseInfo

ncRNA ID	novel_osa_miR2688
Species	Oryza sativa
Class	miRNA
Genome position	Chr5:25798360-25798465 [-]
Reference genome	IRGSP-1.0
Source	SRR1849784
Length	24
Mature sequence(if miRNA)	1 - GUUACGAGAUGUAGAAGUUGAAUU - 24
Stem-loop(if miRNA)	--           A      C   -             U    C   AUA  C U   UUCAACUUCUA AUCUUG AAC AAAAAAACAAAUU GACU UGA   UA G U   ||||||||||| |||||| ||| ||||||||||||| |||| |||   || |   AAGUUGAAGAU UAGAGC UUG UUUUUUUGUUUAA UUGG GUU   AU C A UU           G      A   C             U    C   --G  - A
Stem-loop sequence	UUCAACUUCUAAAUCUUGCAACAAAAAAACAAAUUUGACUCUGAAUAUACGUUAACUAGUUGCGGUUUAAUUUGUUUUUUUCGUUACGAGAUGUAGAAGUUGAAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015793191.1	ncRNA:24   UUAAGUUGAAGAUGUAGAGCAUUG   1   |||||||=||*||||||||||||| targets:454   AAUUCAAUUUAUACAUCUCGUAAC   477 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group probable receptor-like protein kinase At1g67000 (LOC4327950), transcript variant X1, mRNA	probable receptor-like protein kinase At1g67000(LOC4327950)	coding protein	psRNATarget
XM_015792915.1	ncRNA:24   UUAAGUUGAAGAUGUAGAGCAUUG   1   ||||=|||||||||||||||*||| targets:1889   AAUUUAACUUCUACAUCUCGCAAC   1912 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase 89B1 (LOC4345896), transcript variant X1, mRNA	UDP-glycosyltransferase 89B1(LOC4345896)	coding protein	psRNATarget
XM_015793197.1	ncRNA:24   UUAAGUUGAAGAUGUAGAGCAUUG   1   |||||||=||*||||||||||||| targets:456   AAUUCAAUUUAUACAUCUCGUAAC   479 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group probable receptor-like protein kinase At1g67000 (LOC4327950), transcript variant X2, mRNA	probable receptor-like protein kinase At1g67000(LOC4327950)	coding protein	psRNATarget