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BaseInfo

ncRNA ID novel_osa_miR2683
Species Oryza sativa
Class miRNA
Genome position Chr4:9640569-9640640 [+]
Reference genome IRGSP-1.0
Source SRR1555746;SRR1555749;SRR2098822;SRR2098823;SRR2099745;SRR1556014;SRR4407953;SRR4407954;SRR1556016;SRR4407955;SRR4407956;SRR4407957;SRR4407958;SRR4407959;SRR4407960;SRR4407961;SRR4407962
Length 24
Mature sequence(if miRNA) 1 - AGAGUAGAGUAGAAGAAGUCGGAG - 24
Stem-loop(if miRNA) --         U     A  UC      AUU    A
  AGAGUAGAG AGAAG AG  GGAGGA   CCGG G
  ||||||||| ||||| ||  ||||||   |||| U
  UCUCGUCUU UCUUU UC  UCUCCU   GGCU U
UG         -     A  CC      AAU    A
Stem-loop sequence AGAGUAGAGUAGAAGAAGUCGGAGGAAUUCCGGAGUUAUCGGUAAUCCUCUCCCUAUUUCUUUCUGCUCUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288356.1
ncRNA:24   GAGGCUGAAGAAGAUGAGAUGAGA   1
  ||||||||||*|||||||||||||
targets:43   CUCCGACUUCCUCUACUCUACUCU   66

1.0 Oryza sativa Japonica Group cDNA, clone: J090024J04, full insert sequence NA coding protein psRNATarget