ncRNA ID | novel_osa_miR2683 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:9640569-9640640 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR1555749;SRR2098822;SRR2098823;SRR2099745;SRR1556014;SRR4407953;SRR4407954;SRR1556016;SRR4407955;SRR4407956;SRR4407957;SRR4407958;SRR4407959;SRR4407960;SRR4407961;SRR4407962 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAGUAGAGUAGAAGAAGUCGGAG - 24 |
Stem-loop(if miRNA) |
--         U     A  UC      AUU    A   AGAGUAGAG AGAAG AG  GGAGGA   CCGG G   ||||||||| ||||| ||  ||||||   |||| U   UCUCGUCUU UCUUU UC  UCUCCU   GGCU U UG         -     A  CC      AAU    A |
Stem-loop sequence | AGAGUAGAGUAGAAGAAGUCGGAGGAAUUCCGGAGUUAUCGGUAAUCCUCUCCCUAUUUCUUUCUGCUCUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288356.1 |
|
1.0 | Oryza sativa Japonica Group cDNA, clone: J090024J04, full insert sequence | NA | coding protein | psRNATarget |