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BaseInfo

ncRNA ID novel_osa_miR2679
Species Oryza sativa
Class miRNA
Genome position Chr4:8842648-8842716 [+]
Reference genome IRGSP-1.0
Source SRR1555746;SRR1556014
Length 24
Mature sequence(if miRNA) 1 - GGAUUGUCUGAUAUCAGGUCGGAU - 24
Stem-loop(if miRNA)             AUCAGGUCGGAUAGUCCUAUG
GGAUUGUCUGAU                     U
||||||||||||                     G
AGUCUAUCAGAC                     A
            UAGAGUCAAGUCUGAUAGGCU
Stem-loop sequence GGAUUGUCUGAUAUCAGGUCGGAUAGUCCUAUGUGAUCGGAUAGUCUGAACUGAGAUCAGACUAUCUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015779717.1
ncRNA:24   UAGGCUGGACUAUAGUCUGUUAGG   1
  ||||||||||||||||||||||||
targets:847   AUCCGACCUGAUAUCAGACAAUCC   870

0.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280694 (LOC107280694), transcript variant X2, mRNA uncharacterized LOC107280694(LOC107280694) coding protein psRNATarget
XM_015779716.1
ncRNA:24   UAGGCUGGACUAUAGUCUGUUAGG   1
  ||||||||||||||||||||||||
targets:847   AUCCGACCUGAUAUCAGACAAUCC   870

0.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280694 (LOC107280694), transcript variant X1, mRNA uncharacterized LOC107280694(LOC107280694) coding protein psRNATarget