ncRNA ID | novel_osa_miR2678 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr2:20564915-20565108 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1849784;SRR2098557 |
Length | 24 |
Mature sequence(if miRNA) | 171 - UGAUAGAUACAAUGAGAGACCGGG - 194 |
Stem-loop(if miRNA) |
--     G                               AGG                     AA       UA        -      U   ACCUC   UGAUA AUACAAUGAGAGACCGGGAUUUAUUCUGGGC   GAACCAAUUUACUUAUGAUAG  ACAAUAA  GAUUGGGA UUAGUU CAC     U   ||||| |||||||||||||||||||||||||||||||   |||||||||||||||||||||  |||||||  |||||||| |||||| |||   ACUAU UAUGUUACUCUCUGGCCCUAAAUAAGACCCG   CUUGGUUAAAUGAAUACUAUC  UGUUAUU  CUGGCCCU AGUUAG GUG     U AU     A                               GUA                     CC       CC        U      -   AUCAG |
Stem-loop sequence | UGAUAGAUACAAUGAGAGACCGGGAUUUAUUCUGGGCAGGGAACCAAUUUACUUAUGAUAGAAACAAUAAUAGAUUGGGAUUAGUUUCACACCUCUUGACUAGUGGAUUGAUUCCCGGUCCCUUAUUGUCCCUAUCAUAAGUAAAUUGGUUCAUGGCCCAGAAUAAAUCCCGGUCUCUCAUUGUAUAUAUCAUA |