ncRNA ID | novel_osa_miR2666 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:15577495-15577623 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1849783 |
Length | 22 |
Mature sequence(if miRNA) | 108 - UAGGCUAUUUUGUGAGACGAAU - 129 |
Stem-loop(if miRNA) |
--                 C           U              AAUUA  GGUUGAUUACU   UAGGCUAUUUUGUGAGA GAAUUUAAUGA GUAUAUUAAUCCAU     GC           G   ||||||||||||||||| ||||||||||| ||||||||||||||     ||           U   AUCCGAUAAAACGCUCU CUUAGAUUGCU CAUAUAAUUAGGUA     CG           A GG                 A           C              CUAAA  AUGUCACUACG |
Stem-loop sequence | UAGGCUAUUUUGUGAGACGAAUUUAAUGAUGUAUAUUAAUCCAUAAUUAGCGGUUGAUUACUGUAGCAUCACUGUAGCAAAUCAUGGAUUAAUAUACCUCGUUAGAUUCAUCUCGCAAAAUAGCCUAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK107263.1 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:002-125-H03, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015781418.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group serine/arginine repetitive matrix protein 1 (LOC4335446), mRNA | serine/arginine repetitive matrix protein 1(LOC4335446) | coding protein | psRNATarget |