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BaseInfo

ncRNA ID novel_osa_miR2658
Species Oryza sativa
Class miRNA
Genome position Chr4:741259-741373 [-]
Reference genome IRGSP-1.0
Source SRR1555746;SRR1555747;SRR2097779;SRR2098557;SRR2098560;SRR1555751;SRR2099745;SRR1556011;SRR4407775;SRR4407777;SRR1556014;SRR4407956;SRR4407957;SRR4407959;SRR1556018;SRR1556020
Length 24
Mature sequence(if miRNA) 1 - AAUGUUACUAACACUUUGUCGGAU - 24
Stem-loop(if miRNA) --           A                      C      AUCUCA  -     U
  CCGACAAAGUG UAGUAACAUUGUUCACAAAAUU ACAUAU      UC UGGUU U
  ||||||||||| |||||||||||||||||||||| ||||||      || ||||| A
  GGCUGUUUCAC AUCAUUGUAACAAGUGUUUUAA UGUAUA      AG AUCAA U
UA           A                      C      -GAUAC  U     A
Stem-loop sequence CCGACAAAGUGAUAGUAACAUUGUUCACAAAAUUCACAUAUAUCUCAUCUGGUUUUAUAAACUAUGACAUAGAUAUGUCAAUUUUGUGAACAAUGUUACUAACACUUUGUCGGAU