| ncRNA ID | novel_osa_miR2649 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr1:8913556-8913765 [-] |
| Reference genome | IRGSP-1.0 |
| Source | SRR1849781 |
| Length | 25 |
| Mature sequence(if miRNA) | 1 - UAAAUAUCAAGAUUUCGGAUGGCUA - 25 |
| Stem-loop(if miRNA) |
-- C C AC U C GAUU GCC UUCGGAAUCUUG UAUUUAGAAGUAUUAAACGUAGAUUAUUGGCAAAAC AUUCCAUAACCCCUAGGUUAUUUUGCG GAUGAAUCUAAU AUG A ||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||| CGG AGGCUUUAGAAC AUAAAUCUUCAUAAUUUGCAUCUAAUGGCUGUUUUG UAAGGUAUUGGGGAUCCGAUAAAACGC CUGCUUAGAUUA UAC A AU U U GC U C AUAU |
| Stem-loop sequence | GCCCUUCGGAAUCUUGCUAUUUAGAAGUAUUAAACGUAGAUUAUUGGCAAAACACAUUCCAUAACCCCUAGGUUAUUUUGCGUGAUGAAUCUAAUCAUGGAUUAAUAUACAUCAUUAGAUUCGUCUCGCAAAAUAGCCUAGGGGUUAUGGAAUCGGUUUUGUCGGUAAUCUACGUUUAAUACUUCUAAAUAUCAAGAUUUCGGAUGGCUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_015791997.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107276073 (LOC107276073), transcript variant X2, mRNA | uncharacterized LOC107276073(LOC107276073) | coding protein | psRNATarget | |||||||||
| XM_015791996.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107276073 (LOC107276073), transcript variant X1, mRNA | uncharacterized LOC107276073(LOC107276073) | coding protein | psRNATarget |