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BaseInfo

ncRNA ID	novel_osa_miR2621
Species	Oryza sativa
Class	miRNA
Genome position	Chr12:12079639-12079737 [-]
Reference genome	IRGSP-1.0
Source	SRR1849779
Length	24
Mature sequence(if miRNA)	76 - UCACCAGAUCUCAAAUCCAAACUC - 99
Stem-loop(if miRNA)	--                           UUC     AGA    CAAAG   UCACCAGAUCUCAAAUCCAAACUCAAC   GUUUA   GAAA     A   |||||||||||||||||||||||||||   |||||   ||||     A   AGUGGUCUAGAGUUUAGGUUUGAGUUG   UAAGU   CUUU     G AG                           UGA     GAG    AAACA
Stem-loop sequence	UCACCAGAUCUCAAAUCCAAACUCAACUUCGUUUAAGAGAAACAAAGAAGACAAAUUUCGAGUGAAUAGUGUUGAGUUUGGAUUUGAGAUCUGGUGAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK102570.1	ncRNA:24   CUCAAACCUAAACUCUAGACCACU   1   |||||||||||||||||=|||||| targets:25   GAGUUUGGAUUUGAGAUUUGGUGA   48 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J033097L21, full insert sequence	NA	coding protein	psRNATarget
AK073040.1	ncRNA:24   CUCAAACCUAAACUCUAGACCACU   1   *****|||||||||||||||||** targets:3102   UCCACUGGAUUUGAGAUCUGGUCC   3125 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033000A12, full insert sequence	NA	coding protein	psRNATarget
XM_015771133.1	ncRNA:24   CUCAAACCUAAACUCUAGACCACU   1   *****|||||||||||||||||** targets:3151   UCCACUGGAUUUGAGAUCUGGUCC   3174 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group mitogen-activated protein kinase kinase kinase YODA (LOC4330249), transcript variant X2, mRNA	mitogen-activated protein kinase kinase kinase YODA(LOC4330249)	coding protein	psRNATarget
XM_015771132.1	ncRNA:24   CUCAAACCUAAACUCUAGACCACU   1   *****|||||||||||||||||** targets:3225   UCCACUGGAUUUGAGAUCUGGUCC   3248 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group mitogen-activated protein kinase kinase kinase YODA (LOC4330249), transcript variant X1, mRNA	mitogen-activated protein kinase kinase kinase YODA(LOC4330249)	coding protein	psRNATarget