ncRNA ID | novel_osa_miR2612 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr2:21440966-21441143 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1849778;SRR1849781 |
Length | 24 |
Mature sequence(if miRNA) | 155 - AGCACCACGUAGGAUUCUGAAAGG - 178 |
Stem-loop(if miRNA) |
---     U          A                   GUGA   U     ---------G        ---   UU        -     G   GG    UUUAG AUCUUACGUG UGCUGAUGUGGCAUGCCAC    ACG GGCGU          UCCUUUUU   UUU  CUUCCUUU CUUCU CUU  A    ||||| |||||||||| |||||||||||||||||||    ||| |||||          ||||||||   |||  |||||||| ||||| |||  G    AAGUC UAGGAUGCAC ACGACUACACCGUACGGUG    UGC CUGUA          AGGAAAAG   AAA  GGAGGAAA GAAGA GAA  A GGA     U          C                   ----   -     AAUUUUUUAA        AAA   GG        A     G   GA |
Stem-loop sequence | UUUAGUAUCUUACGUGAUGCUGAUGUGGCAUGCCACGUGAACGUGGCGUGUCCUUUUUUUUUUCUUCCUUUCUUCUGCUUGGAGAAGAAGGAGAAGAAAAGGAGGGGAAAAAAGAAAAGGAAAUUUUUUAAAUGUCCGUGUGGCAUGCCACAUCAGCACCACGUAGGAUUCUGAAAGG |