ncRNA ID | novel_osa_miR2588 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:4639946-4640012 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR2098823;SRR2099568;SRR2099745;SRR4407775;SRR1556014;SRR4407954;SRR4407955;SRR4407956;SRR4407957;SRR4407961;SRR4407962 |
Length | 24 |
Mature sequence(if miRNA) | 44 - UGUAGUUUUGUGAGAAUGGAGACA - 67 |
Stem-loop(if miRNA) |
--                                  UCUCCAUUCUCACAAAACUACAUGUUUUAGCA   |||||||||||||||||||||||||||||||U   AGAGGUAAGAGUGUUUUGAUGUGUAAAAUUGU AC                                |
Stem-loop sequence | UCUCCAUUCUCACAAAACUACAUGUUUUAGCAUUGUUAAAAUGUGUAGUUUUGUGAGAAUGGAGACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK066750.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J013074O22, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK318562.1 |
|
3.0 | Oryza sativa Japonica Group cDNA, clone: J075190F14, full insert sequence | NA | coding protein | psRNATarget |