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BaseInfo

ncRNA ID novel_osa_miR2587
Species Oryza sativa
Class miRNA
Genome position Chr6:24563208-24563297 [+]
Reference genome IRGSP-1.0
Source SRR1849777
Length 24
Mature sequence(if miRNA) 67 - AUGAAAUGUUCCAUCCGAUACUAG - 90
Stem-loop(if miRNA) --    C      UG                 A        CACC
  AGUA UGGAUG  ACAUUUCAUAGUAUAAU AAUCUAGA    U
  |||| ||||||  ||||||||||||||||| ||||||||
  UCAU GCCUAC  UGUAAAGUAUCAUGUUG UUAGAUCU    U
GA    A      CU                 A        AUCC
Stem-loop sequence AGUACUGGAUGUGACAUUUCAUAGUAUAAUAAAUCUAGACACCUUCCUAUCUAGAUUAGUUGUACUAUGAAAUGUUCCAUCCGAUACUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288458.1
ncRNA:24   GAUCAUAGCCUACCUUGUAAAGUA   1
  ||||||*|||||||||||*|||||
targets:336   CUAGUACCGGAUGGAACACUUCAU   359

2.5 Oryza sativa Japonica Group cDNA, clone: J090035E13, full insert sequence NA coding protein psRNATarget