ncRNA ID | novel_osa_miR2583 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr2:21440965-21441144 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1849777;SRR2040381;SRR2040402;SRR1738217 |
Length | 24 |
Mature sequence(if miRNA) | 157 - GCACCACGUAGGAUUCUGAAAGGA - 180 |
Stem-loop(if miRNA) |
---C     U          A                   GUGA   U     ---------G        ---   UU        -     G   GG     UUUAG AUCUUACGUG UGCUGAUGUGGCAUGCCAC    ACG GGCGU          UCCUUUUU   UUU  CUUCCUUU CUUCU CUU  A     ||||| |||||||||| |||||||||||||||||||    ||| |||||          ||||||||   |||  |||||||| ||||| |||  G     AAGUC UAGGAUGCAC ACGACUACACCGUACGGUG    UGC CUGUA          AGGAAAAG   AAA  GGAGGAAA GAAGA GAA  A AGGA     U          C                   ----   -     AAUUUUUUAA        AAA   GG        A     G   GA |
Stem-loop sequence | CUUUAGUAUCUUACGUGAUGCUGAUGUGGCAUGCCACGUGAACGUGGCGUGUCCUUUUUUUUUUCUUCCUUUCUUCUGCUUGGAGAAGAAGGAGAAGAAAAGGAGGGGAAAAAAGAAAAGGAAAUUUUUUAAAUGUCCGUGUGGCAUGCCACAUCAGCACCACGUAGGAUUCUGAAAGGA |