ncRNA ID | novel_osa_miR2577 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:33130636-33130764 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR2097778;SRR2098822;SRR2099567;SRR2099746;SRR1556011;SRR1298766;SRR1556014;SRR4407958;SRR5049781 |
Length | 23 |
Mature sequence(if miRNA) | 107 - GGUCAUGCUGCGGCAGCCUCACU - 129 |
Stem-loop(if miRNA) |
--   A      --             UCUGA       A      ------GU    -----     CUG   UGA GCUGCC  AGCAUGAUCUAGC     AUGAUCA CAAGAU        GCUC     CCACA   C   ||| ||||||  |||||||||||||     ||||||| ||||||        ||||     |||||   C   ACU CGACGG  UCGUACUGGAUCG     UACUGGU GUUCUG        CGAG     GGUGU   U UC   C      CG             UUCCG       -      AUCGUUGU    UUCUA     CCU |
Stem-loop sequence | UGAAGCUGCCAGCAUGAUCUAGCUCUGAAUGAUCAACAAGAUGUGCUCCCACACUGCCUUCCUGUGGAUCUUGAGCUGUUGCUAGUCUUGUGGUCAUGCCUUGCUAGGUCAUGCUGCGGCAGCCUCACU |