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BaseInfo

ncRNA ID novel_osa_miR2574
Species Oryza sativa
Class miRNA
Genome position Chr3:32454995-32455128 [+]
Reference genome IRGSP-1.0
Source SRR1555746;SRR1555747;SRR1556014;SRR1556020;SRR1654490
Length 22
Mature sequence(if miRNA) 113 - GCGUGCGAGGAGCCAAGCAUGA - 134
Stem-loop(if miRNA) --    C       C         CU   -    CU       UCAGU    -    C     ---    C
  AUGC UGGCUCC UGUAUGCCA  CGC GUAG  GCCAAAC     UGAA ACAA UGCCU   UCUC C
  |||| ||||||| |||||||||  ||| ||||  |||||||     |||| |||| |||||   |||| G
  UACG ACCGAGG GCGUGCGGU  GCG CAUC  CGGUUUG     GCUU UGUU ACGGA   AGAG G
AG    A       A         AG   U    -U       --CAU    G    -     CUU    C
Stem-loop sequence AUGCCUGGCUCCCUGUAUGCCACUCGCGUAGCUGCCAAACUCAGUUGAAACAACUGCCUUCUCCCGGCGAGAUUCAGGCAUUGUGUUCGUACGUUUGGCUCUACUGCGGAUGGCGUGCGAGGAGCCAAGCAUGA