ncRNA ID | novel_osa_miR2565 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:18672629-18672683 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR2098557;SRR1556014 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGGGGAUGGGGAAUUGAGGAAGGA - 24 |
Stem-loop(if miRNA) |
--  GG       A      G     AC   UG  GAUGGGG AUUGAG AAGGA  C   ||  ||||||| |||||| |||||   AC  UUACUCC UAACUU UUCCU  C UA  UU       A      -     CC |
Stem-loop sequence | UGGGGAUGGGGAAUUGAGGAAGGAACCCCCUCCUUUUCAAUACCUCAUUUUCAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK102177.1 |
|
0.0 | Oryza sativa Japonica Group cDNA clone:J033086L12, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK241331.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J065144C21, full insert sequence | NA | coding protein | psRNATarget |