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BaseInfo

ncRNA ID	novel_osa_miR2556
Species	Oryza sativa
Class	miRNA
Genome position	Chr3:21904466-21904578 [+]
Reference genome	IRGSP-1.0
Source	SRR1849776;SRR2099428;SRR4407953
Length	24
Mature sequence(if miRNA)	1 - AAGAGAUUUUAGGUGGAUGUGACA - 24
Stem-loop(if miRNA)	--   A      A                  -AA   C  A     G  CA     CU   AAG GAUUUU GGUGGAUGUGACAUAUCU   UAC AC AAUCU GA  GUUUU  U   ||| |||||| ||||||||||||||||||   ||| || ||||| ||  |||||   UUC CUAAAA CUACCUACACUGUGUAGG   AUG UG UUAGA CU  UAGAA  A CA   C      C                  AUC   A  C     A  --     CA
Stem-loop sequence	AAGAGAUUUUAGGUGGAUGUGACAUAUCUAAUACCACAAAUCUGGACAGUUUUCUUAACAAGAUUCAAGAUUCGUAGUACUAGGAUGUGUCACAUCCAUCCAAAAUCCCUUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK069433.1	ncRNA:24   ACA--GUGUAGGUGGAUUUUAGAGAA   1   |||--||=|||||||||||||||||| targets:366   UGUAUCAUAUCCACCUAAAAUCUCUU   391 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J023025M19, full insert sequence	NA	coding protein	psRNATarget
AK288305.1	ncRNA:24   ACAGUGUAGGUGGAUUUUAGAGAA   1   |*||*|||||==|||||||||||| targets:1048   UAUCUCAUCCGUCUAAAAUCUCUU   1071 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090020F20, full insert sequence	NA	coding protein	psRNATarget
AK288305.1	ncRNA:24   ACAGUGUAGGUGGAUUUUAGAGAA   1   |*||*|||||==|||||||||||| targets:1379   UAUCUCAUCCGUCUAAAAUCUCUU   1402 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090020F20, full insert sequence	NA	coding protein	psRNATarget