Search result

BaseInfo

ncRNA ID novel_osa_miR2555
Species Oryza sativa
Class miRNA
Genome position Chr3:16562716-16562807 [+]
Reference genome IRGSP-1.0
Source SRR1555746;SRR1556011;SRR1556014;SRR4407956
Length 24
Mature sequence(if miRNA) 69 - AAUGGACCGCACGCGAAAAUGAGC - 92
Stem-loop(if miRNA) --          A   A                            U
  UCAUUUUCGC UGC GUUUAUUUAAGAGGACCGCAUGGGAAAA C
  |||||||||| ||| ||||||||||||||||||||||||||||
  AGUAAAAGCG ACG CAGGUAAAUUCUCCUGGCGUGCCCUUUU G
CG          C   C                            A
Stem-loop sequence UCAUUUUCGCAUGCAGUUUAUUUAAGAGGACCGCAUGGGAAAAUCGAUUUUCCCGUGCGGUCCUCUUAAAUGGACCGCACGCGAAAAUGAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK063216.1
ncRNA:24   CGAG-UAAAAGCGCACGCCAGGUAA   1
  **||-|||*||*|||||||||||||
targets:690   AAUCGAUUAUCCCGUGCGGUCCAUU   714

2.0 Oryza sativa Japonica Group cDNA clone:001-112-D12, full insert sequence NA coding protein psRNATarget