ncRNA ID | novel_osa_miR2555 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:16562716-16562807 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR1556011;SRR1556014;SRR4407956 |
Length | 24 |
Mature sequence(if miRNA) | 69 - AAUGGACCGCACGCGAAAAUGAGC - 92 |
Stem-loop(if miRNA) |
--          A   A                            U   UCAUUUUCGC UGC GUUUAUUUAAGAGGACCGCAUGGGAAAA C   |||||||||| ||| ||||||||||||||||||||||||||||   AGUAAAAGCG ACG CAGGUAAAUUCUCCUGGCGUGCCCUUUU G CG          C   C                            A |
Stem-loop sequence | UCAUUUUCGCAUGCAGUUUAUUUAAGAGGACCGCAUGGGAAAAUCGAUUUUCCCGUGCGGUCCUCUUAAAUGGACCGCACGCGAAAAUGAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK063216.1 |
|
2.0 | Oryza sativa Japonica Group cDNA clone:001-112-D12, full insert sequence | NA | coding protein | psRNATarget |