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BaseInfo

ncRNA ID	novel_osa_miR2547
Species	Oryza sativa
Class	miRNA
Genome position	Chr12:22625755-22625917 [-]
Reference genome	IRGSP-1.0
Source	SRR1849775
Length	24
Mature sequence(if miRNA)	1 - GAAUGAUUAAAGUUGGACACGAAA - 24
Stem-loop(if miRNA)	--  A                 C A        -           ---U      UAUUUUUGUUGU         AUAAA       UA   UC UGUCUAAUUUUGAUCGU U UCUUAUUU AAAUUUUUUUA    AAUUAG            UAUGAGAUG     ACAUAAA  G   || ||||||||||||||||| | |||||||| |||||||||||    ||||||            |||||||||     |||||||   AG ACAGGUUGAAAUUAGUA G AGAAUAAA UUUAAAAAAAU    UUAAUU            GUAUUCUGU     UGUAUUU  U AA  C                 A C        C           UUUU      ---------UUU         ----G       CA
Stem-loop sequence	UCAUGUCUAAUUUUGAUCGUCUAUCUUAUUUAAAUUUUUUUAUAAUUAGUAUUUUUGUUGUUAUGAGAUGAUAAAACAUAAAUAGUACUUUAUGUGUGUCUUAUGUUUUUAAUUUUUUUAAAAAAAUUUCAAAUAAGACGAAUGAUUAAAGUUGGACACGAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK289040.1	ncRNA:24   AAAGCACAGGUUGAAAUUAGUAAG   1   |||||||||=|||||||||||||= targets:2099   UUUCGUGUCUAACUUUAAUCAUUU   2122 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090091O20, full insert sequence	NA	coding protein	psRNATarget
AK288762.1	ncRNA:24   AAAGCACAGGUUGAAAUUAGUAAG   1   ||||*||||=||||||||*||||| targets:915   UUUCAUGUCUAACUUUAAACAUUC   938 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090067F13, full insert sequence	NA	coding protein	psRNATarget
AK242639.1	ncRNA:24   AAAGCACAGGUUGAAAUUAGUAAG   1   |||=||**|||||||||||||||= targets:3071   UUUUGUACCCAACUUUAAUCAUUU   3094 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J090024A18, full insert sequence	NA	coding protein	psRNATarget