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BaseInfo

ncRNA ID	novel_osa_miR2542
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:17565908-17565983 [-]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR1556014
Length	20
Mature sequence(if miRNA)	1 - AGGGCGAGGGGUGGAACGGU - 20
Stem-loop(if miRNA)	----C       G     GAG      CCGUCGCA    C      UCCGCCC UCGCC   UCGUCG        GGGU G      ||||||| |||||   ||||||        ||||      AGGUGGG AGCGG   AGCAGC        UCCG U UGGCA       G     --G      AACCUUCA    C
Stem-loop sequence	CUCCGCCCGUCGCCGAGUCGUCGCCGUCGCAGGGUCGUCGCCUACUUCCAACGACGAGGGCGAGGGGUGGAACGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015787085.1	ncRNA:20   UGGCAAGGUGGGGAGCGGGA   1   |||*|||||||||||||||* targets:124   ACCAUUCCACCCCUCGCCCG   143 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group RING-H2 finger protein ATL45-like (LOC107275279), mRNA	RING-H2 finger protein ATL45-like(LOC107275279)	coding protein	psRNATarget
CT835311.1	ncRNA:20   UGGCAAGGUGGGGAGCGGGA   1   *||*|||||||||||||||* targets:90   CCCCUUCCACCCCUCGCCCC   109 Target Full Sequence	2.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA040H18, full insert sequence	NA	coding protein	psRNATarget
CT835352.1	ncRNA:20   UGGCAAGGUGGGGAGCGGGA   1   *||*|||||||||||||||* targets:91   CCCCUUCCACCCCUCGCCCC   110 Target Full Sequence	2.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI013H20, full insert sequence	NA	coding protein	psRNATarget