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BaseInfo

ncRNA ID	novel_osa_miR2528
Species	Oryza sativa
Class	miRNA
Genome position	Chr7:79198-79381 [+]
Reference genome	IRGSP-1.0
Source	SRR1849775;SRR2040389;SRR2040391;SRR2857729;SRR2857730;SRR2857731
Length	24
Mature sequence(if miRNA)	161 - ACUCGAAACAGUUUGACUUUGACC - 184
Stem-loop(if miRNA)	--              C  AA        C           U   -U            A AUUA    AU   U       A UU    AUU   UCAAAGUCAAACUG UU  AGUUUGAU AAGUUUAUAGA AAA  AUAGUAAUAUUU C    CCAA  UAG UUUAUUA A  AAUA   A   |||||||||||||| ||  |||||||| ||||||||||| |||  |||||||||||| |    ||||  ||| ||||||| |  ||||   AGUUUCAGUUUGAC AA  UCAAAUUG UUCAAAUAUCU UUU  UAUCAUUAUAAA G    GGUU  AUU AAAUAAU U  UUAU   A CC              A  GC        A           U   UU            A -CUG    CU   U       A UU    AUA
Stem-loop sequence	UCAAAGUCAAACUGCUUAAAGUUUGAUCAAGUUUAUAGAUAAAUAUAGUAAUAUUUACAUUACCAAAUUAGUUUUAUUAAAUUAAUAAUUAAAUAUAUUUUUAUAAUAAAUUUAUCUUGGGUCGAAAAUAUUACUAUUUUUUUUCUAUAAACUUAGUUAAACUCGAAACAGUUUGACUUUGACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK241906.1	ncRNA:24   CCAGUUUCAGUUUGACAAAGCUCA   1   |||||||*||||||||||||*||| targets:942   GGUCAAAUUCAAACUGUUUCAAGU   965 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J075049G22, full insert sequence	NA	coding protein	psRNATarget
AK242901.1	ncRNA:24   CCAGUUUCAGUUUGACAAAGCUCA   1   ||||||||*|||||||||||*||| targets:1272   GGUCAAAGACAAACUGUUUCAAGU   1295 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090081L24, full insert sequence	NA	coding protein	psRNATarget
XM_015788305.1	ncRNA:24   CCAGUUUCAGUUUGACAAAGCUCA   1   ||||||||*|||||||||||*||| targets:1322   GGUCAAAGACAAACUGUUUCAAGU   1345 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group F-box/FBD/LRR-repeat protein At1g13570 (LOC4340210), transcript variant X1, mRNA	F-box/FBD/LRR-repeat protein At1g13570(LOC4340210)	coding protein	psRNATarget
AK288358.1	ncRNA:24   CCAGUUUCAGUUUGACAAAGCUCA   1   |*||||||||||||||||||*||| targets:899   GCUCAAAGUCAAACUGUUUCAAGU   922 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090024L19, full insert sequence	NA	coding protein	psRNATarget