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BaseInfo

ncRNA ID novel_osa_miR2506
Species Oryza sativa
Class miRNA
Genome position Chr2:34287871-34288009 [-]
Reference genome IRGSP-1.0
Source SRR1555746;SRR1556014
Length 24
Mature sequence(if miRNA) 1 - AGAAAGCUGUGGGAAGAAAUGGCA - 24
Stem-loop(if miRNA) --    GC                   A     -     --G    A   -----A     AUU    GA  GAU
  CCAU  CUUUCCACAGCUUUCUUGA CUUCU CUUGU   CCUC CUC      CUUUC   ACUG  GA   A
  ||||  ||||||||||||||||||| ||||| |||||   |||| |||      |||||   ||||  ||
  GGUA  GAAGGGUGUCGAAAGAACU GGAGA GAACG   GGAG GGG      GAAGG   UGAC  CU   U
AC    AA                   G     A     UGA    A   AUAUUC     ---    UA  ACG
Stem-loop sequence CCAUGCCUUUCCACAGCUUUCUUGAACUUCUCUUGUGCCUCACUCACUUUCAUUACUGGAGAGAUAUGCAUCAUCAGUGGAAGCUUAUAGGGAGAGGAGUGCAAGAAGAGGGUCAAGAAAGCUGUGGGAAGAAAUGGCA