ncRNA ID | novel_osa_miR2506 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr2:34287871-34288009 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR1556014 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAAAGCUGUGGGAAGAAAUGGCA - 24 |
Stem-loop(if miRNA) |
--    GC                   A     -     --G    A   -----A     AUU    GA  GAU   CCAU  CUUUCCACAGCUUUCUUGA CUUCU CUUGU   CCUC CUC      CUUUC   ACUG  GA   A   ||||  ||||||||||||||||||| ||||| |||||   |||| |||      |||||   ||||  ||   GGUA  GAAGGGUGUCGAAAGAACU GGAGA GAACG   GGAG GGG      GAAGG   UGAC  CU   U AC    AA                   G     A     UGA    A   AUAUUC     ---    UA  ACG |
Stem-loop sequence | CCAUGCCUUUCCACAGCUUUCUUGAACUUCUCUUGUGCCUCACUCACUUUCAUUACUGGAGAGAUAUGCAUCAUCAGUGGAAGCUUAUAGGGAGAGGAGUGCAAGAAGAGGGUCAAGAAAGCUGUGGGAAGAAAUGGCA |