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BaseInfo

ncRNA ID novel_osa_miR2504
Species Oryza sativa
Class miRNA
Genome position Chr1:23870088-23870262 [-]
Reference genome IRGSP-1.0
Source SRR1849775
Length 24
Mature sequence(if miRNA) 1 - GGCGGACGAAAAACGAUCGAGAAU - 24
Stem-loop(if miRNA) --             C    UA                 A  A   A                    --        CAAGUA AAAUAGA
  UCUCGAUCGUUUU CGUC  CCUUGAUCGCUAUUGAC CA CCA GCACGCGAUAUGAUGUUUCU  ACCUCUCA      C       A
  ||||||||||||| ||||  ||||||||||||||||| || ||| ||||||||||||||||||||  ||||||||      |
  AGAGCUAGCAAAA GCAG  GGAACUAGCGAUAACUG GU GGU UGUGCGCUAUACUGUAAAGA  UGGGGAGU      A       U
UA             A    GC                 G  C   G                    UA        -----A CGAUACG
Stem-loop sequence UCUCGAUCGUUUUCCGUCUACCUUGAUCGCUAUUGACACAACCAAGCACGCGAUAUGAUGUUUCUACCUCUCACAAGUACAAAUAGAAUGCAUAGCAAUGAGGGGUAUAGAAAUGUCAUAUCGCGUGUGUGGCUGGGUCAAUAGCGAUCAAGGCGGACGAAAAACGAUCGAGAAU