ncRNA ID | novel_osa_miR2502 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:5433620-5433769 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1849775 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUAAACUUUAACCGUCUGUCU - 21 |
Stem-loop(if miRNA) |
--UUAAAC     C   C            ------------------------    UU   ------ GAAAAAAAUUAAAAACAUAA         UUUAA CGU UGUCUUAUUUAA                        UUUU  UUU      U                    G         ||||| ||| ||||||||||||                        ||||  |||      |                    U         AAAUU GCA GCAGAAUAAAUU                        CAAU  CUC      U                    U ACAGAUUA     A   A            UCUAAAAAAUAUUAAUCAUAAAAA    -A   UACAAU UUGUACUUAUCAAAUGAGCA |
Stem-loop sequence | UUAAACUUUAACCGUCUGUCUUAUUUAAUUUUUUUUUUGAAAAAAAUUAAAAACAUAAGUUACGAGUAAACUAUUCAUGUUUUAACAUCUCAUAACAAAAAUACUAAUUAUAAAAAAUCUUUAAAUAAGACGAACGAUUAAAAUUAGACA |