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BaseInfo

ncRNA ID	novel_osa_miR2500
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:3577265-3577433 [+]
Reference genome	IRGSP-1.0
Source	SRR1849775
Length	22
Mature sequence(if miRNA)	1 - UUCGUAUCCAACGUUUGACUGU - 22
Stem-loop(if miRNA)	--     A                 -       A     -----------------UUUUUU  UAAUUAGUAUUUUCAUUGUUGUUAGAUGA   UUCGU UCCAACGUUUGACUGUC GUCUUAU UGAAA                       UA                             U   ||||| ||||||||||||||||| ||||||| |||||                       ||                             A   AAGUA AGGUUGCAAACUGGCAG CAGAAUA ACUUU                       CU                             A AA     C                 G       A     UUUUAUACUUUUUUUUUAUUUUU  GUUCAGUGCGUAUUUCAUAAUUAGUACAA
Stem-loop sequence	UUCGUAUCCAACGUUUGACUGUCGUCUUAUAUGAAAUUUUUUUAUAAUUAGUAUUUUCAUUGUUGUUAGAUGAUAAAACAUGAUUAAUACUUUAUGCGUGACUUGUCUUUUUAUUUUUUUUUCAUAUUUUUUUCAAAUAAGACGGACGGUCAAACGUUGGACAUGAAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK289090.1	ncRNA:22   UGUCAGUUUGCAACCUAUGCUU   1   ||=|||||||||||||||=||| targets:994   ACGGUCAAACGUUGGAUAUGAA   1015 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090095N19, full insert sequence	NA	coding protein	psRNATarget
AK288706.1	ncRNA:22   UGUCAGUUUGCAACCUAUGCUU   1   ||=|||||||||||||*||||| targets:3077   ACGGUCAAACGUUGGACACGAA   3098 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090061L24, full insert sequence	NA	coding protein	psRNATarget
AK120358.1	ncRNA:22   UGUCAGUUUGCAACCUAUGCUU   1   |==*||||||||||||||=||| targets:1208   AUGAUCAAACGUUGGAUAUGAA   1229 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013067F13, full insert sequence	NA	coding protein	psRNATarget