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BaseInfo

ncRNA ID	novel_osa_miR2494
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:4359641-4359794 [+]
Reference genome	IRGSP-1.0
Source	SRR1849774
Length	24
Mature sequence(if miRNA)	1 - ACUCAUUCCGUUUCAUAAUAUAAG - 24
Stem-loop(if miRNA)	--   -   U            A             C    CCCAC   C      A A     U        CAUAC   ACU CAU CCGUUUCAUAAU UAAGUCAUUCUAG AUUU     AUU AUAUUG U UUAAU AAUCUAGA     A   ||| ||| |||||||||||| ||||||||||||| ||||     ||| |||||| | ||||| ||||||||   UGA GUA GGCAAAGUAUUA AUUCAGUAAGAUC UAAA     UAA UAUAAU A AAUUA UUAGAUCU     U CA   A   -            C             A    AAAUA   A      C C     U        AUCUA
Stem-loop sequence	ACUCAUUCCGUUUCAUAAUAUAAGUCAUUCUAGCAUUUCCCACAUUCAUAUUGAUAUUAAUUAAUCUAGACAUACAUAUCUAUCUAGAUUUAUUAACACUAAUAUAAAUAUAAAAAAUACUAGAAUGACUUACAUUAUGAAACGGAUGAAGUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT835159.1	ncRNA:24   GAAUAUAAUACUUUGCCUUACUCA   1   ||||||||=|||||||||=||||| targets:312   CUUAUAUUGUGAAACGGAGUGAGU   335 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI015J24, full insert sequence	NA	coding protein	psRNATarget
AK106777.1	ncRNA:24   GAAUAUAAUACUUUGCCUUACUCA   1   |||||||||||||||||||*|||| targets:1395   CUUAUAUUAUGAAACGGAAGGAGU   1418 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-115-G12, full insert sequence	NA	coding protein	psRNATarget
CT835025.1	ncRNA:24   GAAUAUAAUACUUUGCCUUACUCA   1   ||||*|||=||||||||||*|||| targets:300   CUUACAUUGUGAAACGGAAGGAGU   323 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI029L19, full insert sequence	NA	coding protein	psRNATarget