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BaseInfo

ncRNA ID novel_osa_miR2491
Species Oryza sativa
Class miRNA
Genome position Chr11:26604249-26604324 [-]
Reference genome IRGSP-1.0
Source SRR1849774
Length 24
Mature sequence(if miRNA) 53 - AAGACUAAUUAAGCCGUCAUUAGC - 76
Stem-loop(if miRNA) --   A        G    C      A    UGG    
  AAG CUAAUUAA CCGU AUUAGC CAUG   GUUAC
  ||| |||||||| |||| |||||| ||||   ||||U
  UUC GAUUAAUU GGCA UAAUCG GUAU   CGAUG
AA   G        A    C      -    UUA    
Stem-loop sequence AAGACUAAUUAAGCCGUCAUUAGCACAUGUGGGUUACUGUAGCAUUUAUGGCUAAUCACGGAUUAAUUAGGCUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
CT831461.1
ncRNA:24   CGAUUACUGCCGAAUUAAUCAGAA   1
  |=||||||=|||||||||||||||
targets:418   GUUAAUGAUGGCUUAAUUAGUCUU   441

1.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110A21, full insert sequence NA coding protein psRNATarget
AK289081.1
ncRNA:24   CGAUUACUGCCGAAUUAAUCAGAA   1
  |=||||||||||||||||||*||*
targets:1362   GUUAAUGACGGCUUAAUUAGACUA   1385

2.5 Oryza sativa Japonica Group cDNA, clone: J090095E02, full insert sequence NA coding protein psRNATarget