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BaseInfo

ncRNA ID	novel_osa_miR2483
Species	Oryza sativa
Class	miRNA
Genome position	Chr8:26472153-26472322 [+]
Reference genome	IRGSP-1.0
Source	SRR1849774
Length	20
Mature sequence(if miRNA)	151 - UAUUUGUGGAGUGAUAUAUC - 170
Stem-loop(if miRNA)	--                C  A                  C     A                U   ----AUU  ACUAUAAAUAU   UAUAUCACUCCACAAA AU CAACUUAAAAUUCAACUU UACAU UCGCAACGAAAAAAAA AAA       UG           A   |||||||||||||||| || |||||||||||||||||| ||||| |||||||||||||||| |||       ||   AUAUAGUGAGGUGUUU UA GUUGAAUUUUAAGUUGAA GUGUA AGUGUUGUUUUUUUUU UUU       UG           C CU                A  C                  A     C                C   AAUUAAA  UCGAUCAAUUG
Stem-loop sequence	UAUAUCACUCCACAAACAUACAACUUAAAAUUCAACUUCUACAUAUCGCAACGAAAAAAAAUAAAAUUUGACUAUAAAUAUACGUUAACUAGCUGUAAAUUAAUUUCUUUUUUUUUGUUGUGACAUGUGAAAGUUGAAUUUUAAGUUGCAUAUUUGUGGAGUGAUAUAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ236483.1	ncRNA:20   CUAUAUAGUGAGGUGUUUAU   1   |||||||||||||||||||| targets:2   GAUAUAUCACUCCACAAAUA   21 Target Full Sequence	0.0	Sequence 2478 from Patent EP2985353	NA	coding protein	psRNATarget
HI404353.1	ncRNA:20   CUAUAUAGUGAGGUGUUUAU   1   |||||||||||||||||||| targets:2   GAUAUAUCACUCCACAAAUA   21 Target Full Sequence	0.0	Sequence 2478 from Patent EP2074227	NA	coding protein	psRNATarget
JB164814.1	ncRNA:20   CUAUAUAGUGAGGUGUUUAU   1   |||||||||||||||||||| targets:2   GAUAUAUCACUCCACAAAUA   21 Target Full Sequence	0.0	Sequence 2478 from Patent EP2559767	NA	coding protein	psRNATarget
AK241681.1	ncRNA:20   CUAUAUAGUGAGGUGUUUAU   1   *||||||||||=|||||||| targets:982   AAUAUAUCACUUCACAAAUA   1001 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J065193N01, full insert sequence	NA	coding protein	psRNATarget
XM_015766600.1	ncRNA:20   CUAUAUAGUGAGGUGUUUAU   1   ||||||*||||=|||||||| targets:1348   GAUAUACCACUUCACAAAUA   1367 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group WAT1-related protein At5g64700 (LOC4325526), mRNA	WAT1-related protein At5g64700(LOC4325526)	coding protein	psRNATarget
XM_015781215.1	ncRNA:20   CUAUAUAGUGAGGUGUUUAU   1   *|||||||||||||||||*| targets:805   AAUAUAUCACUCCACAAACA   824 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group putative beta-glucosidase 15 (LOC107280799), mRNA	putative beta-glucosidase 15(LOC107280799)	coding protein	psRNATarget
AK072337.1	ncRNA:20   CUAUAUAGUGAGGUGUUUAU   1   *|||||||||||||||||*| targets:1511   AAUAUAUCACUCCACAAACA   1530 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023043H01, full insert sequence	NA	coding protein	psRNATarget
AK288773.1	ncRNA:20   CUAUAUAGUGAGGUGUUUAU   1   *|||*||||||||||||||| targets:181   AAUAAAUCACUCCACAAAUA   200 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090068D07, full insert sequence	NA	coding protein	psRNATarget