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BaseInfo

ncRNA ID novel_osa_miR2482
Species Oryza sativa
Class miRNA
Genome position Chr8:24354581-24354807 [+]
Reference genome IRGSP-1.0
Source SRR1849774
Length 24
Mature sequence(if miRNA) 204 - UUCCAGUGUACUGUAGCAAAUUAC - 227
Stem-loop(if miRNA) --            G      A      UA                            A C    U       A          A                    C UCUCACC
  AAUUUGCUGCAG ACACUG AAGCAU  AAAUAUAAUAUCCACACAAUUGAUGGGA A AAAC AUACAAA UGACAGUUUU CCCUUAUUAUCUUACCCUAC C       C
  |||||||||||| |||||| ||||||  |||||||||||||||||||||||||||| | |||| ||||||| |||||||||| |||||||||||||||||||| |       A
  UUAAACGAUGUC UGUGAC UUCGUA  UUUAUAUUAUAGGUGUGUUAACUAUUCU U UUUG UGUGUUU ACUGUCAAAA GGGAAUAAUAGAAUGGGGUG G       C
CA            A      C      -C                            C C    -       C          C                    A UACCACC
Stem-loop sequence AAUUUGCUGCAGGACACUGAAAGCAUUAAAAUAUAAUAUCCACACAAUUGAUGGGAAACAAACUAUACAAAAUGACAGUUUUACCCUUAUUAUCUUACCCUACCCUCUCACCCACCCACCAUGAGUGGGGUAAGAUAAUAAGGGCAAAACUGUCACUUUGUGUGUUUCUCUCUUAUCAAUUGUGUGGAUAUUAUAUUUCAUGCUUCCAGUGUACUGUAGCAAAUUAC