ncRNA ID | novel_osa_miR2482 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:24354581-24354807 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1849774 |
Length | 24 |
Mature sequence(if miRNA) | 204 - UUCCAGUGUACUGUAGCAAAUUAC - 227 |
Stem-loop(if miRNA) |
--            G      A      UA                            A C    U       A          A                    C UCUCACC   AAUUUGCUGCAG ACACUG AAGCAU  AAAUAUAAUAUCCACACAAUUGAUGGGA A AAAC AUACAAA UGACAGUUUU CCCUUAUUAUCUUACCCUAC C       C   |||||||||||| |||||| ||||||  |||||||||||||||||||||||||||| | |||| ||||||| |||||||||| |||||||||||||||||||| |       A   UUAAACGAUGUC UGUGAC UUCGUA  UUUAUAUUAUAGGUGUGUUAACUAUUCU U UUUG UGUGUUU ACUGUCAAAA GGGAAUAAUAGAAUGGGGUG G       C CA            A      C      -C                            C C    -       C          C                    A UACCACC |
Stem-loop sequence | AAUUUGCUGCAGGACACUGAAAGCAUUAAAAUAUAAUAUCCACACAAUUGAUGGGAAACAAACUAUACAAAAUGACAGUUUUACCCUUAUUAUCUUACCCUACCCUCUCACCCACCCACCAUGAGUGGGGUAAGAUAAUAAGGGCAAAACUGUCACUUUGUGUGUUUCUCUCUUAUCAAUUGUGUGGAUAUUAUAUUUCAUGCUUCCAGUGUACUGUAGCAAAUUAC |