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BaseInfo

ncRNA ID	novel_osa_miR2479
Species	Oryza sativa
Class	miRNA
Genome position	Chr7:25312130-25312300 [+]
Reference genome	IRGSP-1.0
Source	SRR1849774;SRR2040408
Length	22
Mature sequence(if miRNA)	1 - UUUUUACUUAUAACGUUUGACC - 22
Stem-loop(if miRNA)	--U    A                   UG          --A           UAUUAUUUAUUUUAU     A    CUU     U    UUUU CUUAUAACGUUUGACCACU  UCUUAUUCAA   UUUUUUUAAAU               UUGUG CUUA   UAUUA C    |||| |||||||||||||||||||  ||||||||||   |||||||||||               ||||| ||||   |||||    AAAA GAAUAUUGUAAACUGGUGA  AGAAUAAGUU   AAAAAAGUUUA               AACAC GAAU   AUGAU U UCC    C                   GU          AAA           UAUUUUUUGUUUUUC     -    UUU     A
Stem-loop sequence	UUUUUACUUAUAACGUUUGACCACUUGUCUUAUUCAAAUUUUUUUAAAUUAUUAUUUAUUUUAUUUGUGACUUACUUUAUUAUCUAUAGUAUUUUAAGCACAACUUUUUGUUUUUUAUAUUUGAAAAAAAAAUUGAAUAAGAUGAGUGGUCAAAUGUUAUAAGCAAAACCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015772731.1	ncRNA:22   CCAGUUUGCAAUAUUCAUUUUU   1   |||||||=||||||||*||||| targets:342   GGUCAAAUGUUAUAAGCAAAAA   363 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group protein NRT1/ PTR FAMILY 6.1 (LOC4326444), mRNA	protein NRT1/ PTR FAMILY 6.1(LOC4326444)	coding protein	psRNATarget
AK241885.1	ncRNA:22   CCAGUUUGCAAUAUUCAUUUUU   1   **|||||*|||||||*|||||| targets:981   UUUCAAAAGUUAUAAUUAAAAA   1002 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065219E22, full insert sequence	NA	coding protein	psRNATarget
XM_015768611.1	ncRNA:22   CCAGUUUGCAAUAUUCAUUUUU   1   **|||||*|||||||*|||||| targets:1097   UUUCAAAAGUUAUAAUUAAAAA   1118 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group subtilisin-like protease SBT1.4 (LOC4330914), mRNA	subtilisin-like protease SBT1.4(LOC4330914)	coding protein	psRNATarget