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BaseInfo

ncRNA ID novel_osa_miR2477
Species Oryza sativa
Class miRNA
Genome position Chr2:19804303-19804465 [+]
Reference genome IRGSP-1.0
Source SRR1555746;SRR1556014;SRR4407962
Length 24
Mature sequence(if miRNA) 140 - AUGAUUGCAUUUAAAAUAGGACGG - 163
Stem-loop(if miRNA) --   A              C  C  G    CG  C    C    A   G            -AUUUUUU   U  U     U
  GUC UAUUUUAAGUGUAA CA GA UUUU  UA CUAA UUUU AUC UCCAUUUUAUUU        UUA AA UAGUA U
  ||| |||||||||||||| || || ||||  || |||| |||| ||| ||||||||||||        ||| || |||||
  CAG AUAAAAUUUACGUU GU CU AAAA  AU GAUU AAAA UAG AGGUAGAAUAGA        AAU UU GUUAU U
GG   G              A  A  -    AA  A    -    C   A            AUUUUUUU   U  U     U
Stem-loop sequence GUCAUAUUUUAAGUGUAACCACGAGUUUUCGUACCUAACUUUUAAUCGUCCAUUUUAUUUAUUUUUUUUAUAAUUAGUAUUUUUAUUGUUUUUAAUUUUUUUAAGAUAAGAUGGAAGAUCAAAAUUAGAUAAAAAAAUCAUGAUUGCAUUUAAAAUAGGACGG