ncRNA ID | novel_osa_miR2477 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr2:19804303-19804465 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR1556014;SRR4407962 |
Length | 24 |
Mature sequence(if miRNA) | 140 - AUGAUUGCAUUUAAAAUAGGACGG - 163 |
Stem-loop(if miRNA) |
--   A              C  C  G    CG  C    C    A   G            -AUUUUUU   U  U     U   GUC UAUUUUAAGUGUAA CA GA UUUU  UA CUAA UUUU AUC UCCAUUUUAUUU        UUA AA UAGUA U   ||| |||||||||||||| || || ||||  || |||| |||| ||| ||||||||||||        ||| || |||||   CAG AUAAAAUUUACGUU GU CU AAAA  AU GAUU AAAA UAG AGGUAGAAUAGA        AAU UU GUUAU U GG   G              A  A  -    AA  A    -    C   A            AUUUUUUU   U  U     U |
Stem-loop sequence | GUCAUAUUUUAAGUGUAACCACGAGUUUUCGUACCUAACUUUUAAUCGUCCAUUUUAUUUAUUUUUUUUAUAAUUAGUAUUUUUAUUGUUUUUAAUUUUUUUAAGAUAAGAUGGAAGAUCAAAAUUAGAUAAAAAAAUCAUGAUUGCAUUUAAAAUAGGACGG |