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BaseInfo

ncRNA ID	novel_osa_miR2471
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:2185176-2185344 [+]
Reference genome	IRGSP-1.0
Source	SRR1849774
Length	20
Mature sequence(if miRNA)	1 - UUCCGUGUUCAACUUUGACU - 20
Stem-loop(if miRNA)	--             -           G      A     UUUUUU     ----------------U  AUAUUUUCAUUGUUAUUAGAUGAU   UUCCGUGUUCAAC UUUGACUGUCC UCUUAU UGAAA      UAUAA                 UC                        A   ||||||||||||| ||||||||||| |||||| |||||      |||||                 ||   AAGGCACAGGUUG AAACUGGUAGG AGAAUA ACUUU      AUAUU                 CG                        A CA             C           A      A     --UUUU     UUUUUAAUUUUUCUAUU  GUGCGUAUUUUAUAAUUAGUAUAA
Stem-loop sequence	UUCCGUGUUCAACUUUGACUGUCCGUCUUAUAUGAAAUUUUUUUAUAAUUCAUAUUUUCAUUGUUAUUAGAUGAUAAAAUAUGAUUAAUAUUUUAUGCGUGGCUUAUCUUUUUAAUUUUUUUAUAUUUUUUUCAAAUAAGAAGGAUGGUCAAACGUUGGACACGGAAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK071908.1	ncRNA:20   UCAGUUUCAACUUGUGCCUU   1   =|||||||||||||=||||| targets:873   GGUCAAAGUUGAACGCGGAA   892 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013060N22, full insert sequence	NA	coding protein	psRNATarget