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BaseInfo

ncRNA ID novel_osa_miR2462
Species Oryza sativa
Class miRNA
Genome position Chr4:35061102-35061195 [+]
Reference genome IRGSP-1.0
Source SRR1849774
Length 24
Mature sequence(if miRNA) 1 - AUCACCUGAUACCUUGCAAGUGUC - 24
Stem-loop(if miRNA) --    CC      C    -        CC      ----AU      AA
  AUCA  UGAUAC UUGC AAGUGUCA  UAAUAU      GGUAGG  U
  ||||  |||||| |||| ||||||||  ||||||      ||||||
  UAGU  ACUAUG AACG UUCAUAGU  AUUAUG      CCAUUC  C
UA    CC      -    C        CC      GACAGU      CG
Stem-loop sequence AUCACCUGAUACCUUGCAAGUGUCACCUAAUAUAUGGUAGGAAUCGCCUUACCUGACAGGUAUUACCUGAUACUUCGCAAGUAUCACCUGAUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI403788.1
ncRNA:24   CUGUGAACGUUCCAUAGUCCACUA   1
  ||=||||||=||||||||||||||
targets:17   GAUACUUGCGAGGUAUCAGGUGAU   40

1.0 Sequence 1913 from Patent EP2074227 NA coding protein psRNATarget
JB164249.1
ncRNA:24   CUGUGAACGUUCCAUAGUCCACUA   1
  ||=||||||=||||||||||||||
targets:17   GAUACUUGCGAGGUAUCAGGUGAU   40

1.0 Sequence 1913 from Patent EP2559767 NA coding protein psRNATarget
LQ235918.1
ncRNA:24   CUGUGAACGUUCCAUAGUCCACUA   1
  ||=||||||=||||||||||||||
targets:17   GAUACUUGCGAGGUAUCAGGUGAU   40

1.0 Sequence 1913 from Patent EP2985353 NA coding protein psRNATarget