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BaseInfo

ncRNA ID	novel_osa_miR2461
Species	Oryza sativa
Class	miRNA
Genome position	Chr2:10772040-10772149 [+]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR1555751;SRR1556014;SRR1556018
Length	24
Mature sequence(if miRNA)	87 - GCGGUUUGAGAGCGUUUGUAGGAA - 110
Stem-loop(if miRNA)	--    G        G    A            GUUUGA        GUAG    U   CUUA GAGCGUUU UAGG UGCCACGUGGCG      GAGCGUUU    GAAG U   |||| |||||||| |||| ||||||||||||      ||||||||    |||| U   GGAU UUUGCGAG GUUU GCGGUGCACCGU      UUUGCGAG    UUUC G AA    G        A    G            AGUAUG        ---G    G
Stem-loop sequence	CUUAGGAGCGUUUGUAGGAUGCCACGUGGCGGUUUGAGAGCGUUUGUAGGAAGUUUGGCUUUGGAGCGUUUGUAUGAUGCCACGUGGCGGUUUGAGAGCGUUUGUAGGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK072169.1	ncRNA:24   AAGGAUGUUUGCGAGAGUUUGGCG   1   |||||||||||||||||||=|||| targets:1039   UUCCUACAAACGCUCUCAAGCCGC   1062 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013132E11, full insert sequence	NA	coding protein	psRNATarget
XM_015760101.1	ncRNA:24   AAGGAUGUUUGCGAGAGUUUGGCG   1   ||||||||||=||||||||=|||| targets:3272   UUCCUACAAAUGCUCUCAAGCCGC   3295 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 3 (LOC4350815), mRNA	putative disease resistance RPP13-like protein 3(LOC4350815)	coding protein	psRNATarget
XM_015777958.1	ncRNA:24   AAGGAUGUUUGCGAGAGUUUGGCG   1   *||||||||||||||||||=|||| targets:1962   AUCCUACAAACGCUCUCAAGCCGC   1985 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group protein argonaute 2-like (LOC107280497), transcript variant X2, mRNA	protein argonaute 2-like(LOC107280497)	coding protein	psRNATarget
XM_015777957.1	ncRNA:24   AAGGAUGUUUGCGAGAGUUUGGCG   1   *||||||||||||||||||=|||| targets:2088   AUCCUACAAACGCUCUCAAGCCGC   2111 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group protein argonaute 2-like (LOC107280497), transcript variant X1, mRNA	protein argonaute 2-like(LOC107280497)	coding protein	psRNATarget
AK288484.1	ncRNA:24   AAGGAUGUUUGCGAGAGUUUGGCG   1   ||||||||||||||||||||||*| targets:2151   UUCCUACAAACGCUCUCAAACCAC   2174 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090040D01, full insert sequence	NA	coding protein	psRNATarget
AK288684.1	ncRNA:24   AAGGAUGUUUGCGAGAGUUUGGCG   1   |||||*|||||||||||||=|||| targets:2856   UUCCUUCAAACGCUCUCAAGCCGC   2879 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090059M06, full insert sequence	NA	coding protein	psRNATarget