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BaseInfo

ncRNA ID	novel_osa_miR2454
Species	Oryza sativa
Class	miRNA
Genome position	Chr10:7583400-7583481 [+]
Reference genome	IRGSP-1.0
Source	SRR1849774
Length	24
Mature sequence(if miRNA)	1 - CAUAAUGUAGCAACCUAGGAUGGG - 24
Stem-loop(if miRNA)	--                        --UCAU       AAG   CAUAAUGUAGCAACCUAGGAUGGG      CCCAUCC   G   ||||||||||||||||||||||||      |||||||   GUAUUACAUCGUUGGAUCCUACUC      GGGUAGG   A GG                        UACUCU       AUC
Stem-loop sequence	CAUAAUGUAGCAACCUAGGAUGGGUCAUCCCAUCCAAGGACUAGGAUGGGUCUCAUCUCAUCCUAGGUUGCUACAUUAUGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK241651.1	ncRNA:24   GGGUAGGAUCCAACGAUGUAAUAC   1   |=*=|||||||||||||=|||||| targets:1049   CUGGUCCUAGGUUGCUAUAUUAUG   1072 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J065191A02, full insert sequence	NA	coding protein	psRNATarget
LQ235666.1	ncRNA:24   GGGU--AGGAUCCAACGAUGUAAUAC   1   =|||--|*|||||||||||=|||||| targets:107   UCCAAAUACUAGGUUGCUAUAUUAUG   132 Target Full Sequence	2.5	Sequence 1661 from Patent EP2985353	NA	coding protein	psRNATarget
JB163997.1	ncRNA:24   GGGU--AGGAUCCAACGAUGUAAUAC   1   =|||--|*|||||||||||=|||||| targets:107   UCCAAAUACUAGGUUGCUAUAUUAUG   132 Target Full Sequence	2.5	Sequence 1661 from Patent EP2559767	NA	coding protein	psRNATarget
HI403536.1	ncRNA:24   GGGU--AGGAUCCAACGAUGUAAUAC   1   =|||--|*|||||||||||=|||||| targets:107   UCCAAAUACUAGGUUGCUAUAUUAUG   132 Target Full Sequence	2.5	Sequence 1661 from Patent EP2074227	NA	coding protein	psRNATarget
XM_015761773.1	ncRNA:24   GGGUAGGAUCCAACGAUGUAAUAC   1   |*||||||||*||||||||||*|| targets:204   CACAUCCUAGAUUGCUACAUUCUG   227 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278736 (LOC107278736), mRNA	uncharacterized LOC107278736(LOC107278736)	coding protein	psRNATarget